Do not follow prebuiltDependencyTags in APEX payload walks.

If prebuilts are active they will have the other direct dependencies
from the source modules.

Bug: 151303681
Test: m nothing
Test: `m` with prebuilts/runtime in the manifest (along with other
  fixes)
Change-Id: I1ffc7e7b528ed9db5ce6ca2ee96c9d23c6548c49